WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0244.2.1 Sequence Name  B0244.2.1
Length (nt)  2591   Chromosome Location  III: 5755539-5765816
Chromosome . Primary Identifier  III Chromosome Location . Start  5755539
Chromosome Location . End  5765816 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0244.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002048 ida-1 B0244.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0244.2 B0244.2 2304   III: 5755595-5755664

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0244.2.1 5755539 5765816 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89990   126   III: 5755539-5755664 Caenorhabditis elegans
Exon89991   160   III: 5761405-5761564 Caenorhabditis elegans
Exon89992   284   III: 5761745-5762028 Caenorhabditis elegans
Exon89996   469   III: 5762424-5762892 Caenorhabditis elegans
Exon89997   104   III: 5762940-5763043 Caenorhabditis elegans
Exon89998   71   III: 5763129-5763199 Caenorhabditis elegans
Exon89999   309   III: 5763279-5763587 Caenorhabditis elegans
Exon90000   136   III: 5763970-5764105 Caenorhabditis elegans
Exon90001   91   III: 5764246-5764336 Caenorhabditis elegans
Exon90002   238   III: 5764382-5764619 Caenorhabditis elegans
Exon90003   280   III: 5764708-5764987 Caenorhabditis elegans
Exon90004   323   III: 5765494-5765816 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0244.2.1 5755539 5765816 1

1 Sequence

Length
2591

1 Sequence Ontology Term

Identifier Name Description
transcript