WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37B11A.1b.1 Sequence Name  Y37B11A.1b.1
Length (nt)  2046   Chromosome Location  III: 5770638-5774583
Chromosome . Primary Identifier  III Chromosome Location . Start  5770638
Chromosome Location . End  5774583 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37B11A.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021343 cutl-23 Y37B11A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37B11A.1b Y37B11A.1b 2046   III: 5770638-5770654

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37B11A.1b.1 5770638 5774583 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90010   17   III: 5770638-5770654 Caenorhabditis elegans
Exon90012   151   III: 5770924-5771074 Caenorhabditis elegans
Exon90014   101   III: 5771149-5771249 Caenorhabditis elegans
Exon90016   173   III: 5771472-5771644 Caenorhabditis elegans
Exon90018   86   III: 5771763-5771848 Caenorhabditis elegans
Exon90020   302   III: 5771896-5772197 Caenorhabditis elegans
Exon90022   148   III: 5772650-5772797 Caenorhabditis elegans
Exon90024   279   III: 5772852-5773130 Caenorhabditis elegans
Exon90026   182   III: 5773404-5773585 Caenorhabditis elegans
Exon90028   77   III: 5773775-5773851 Caenorhabditis elegans
Exon90030   79   III: 5773910-5773988 Caenorhabditis elegans
Exon90032   187   III: 5774037-5774223 Caenorhabditis elegans
Exon90034   194   III: 5774272-5774465 Caenorhabditis elegans
Exon90035   70   III: 5774514-5774583 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37B11A.1b.1 5770638 5774583 1

1 Sequence

Length
2046

1 Sequence Ontology Term

Identifier Name Description
transcript