WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37B11A.2a.1 Sequence Name  Y37B11A.2a.1
Length (nt)  3978   Chromosome Location  III: 5774679-5790650
Chromosome . Primary Identifier  III Chromosome Location . Start  5774679
Chromosome Location . End  5790650 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37B11A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021344 rev-3 Y37B11A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37B11A.2a Y37B11A.2a 3912   III: 5774745-5774905

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37B11A.2a.1 5774679 5790650 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90037   227   III: 5774679-5774905 Caenorhabditis elegans
Exon90039   113   III: 5774952-5775064 Caenorhabditis elegans
Exon90041   255   III: 5775114-5775368 Caenorhabditis elegans
Exon90043   535   III: 5775415-5775949 Caenorhabditis elegans
Exon90045   163   III: 5776161-5776323 Caenorhabditis elegans
Exon90047   114   III: 5776368-5776481 Caenorhabditis elegans
Exon90049   226   III: 5776527-5776752 Caenorhabditis elegans
Exon90051   225   III: 5776795-5777019 Caenorhabditis elegans
Exon90053   512   III: 5777185-5777696 Caenorhabditis elegans
Exon90055   322   III: 5777744-5778065 Caenorhabditis elegans
Exon90058   475   III: 5778112-5778586 Caenorhabditis elegans
Exon90059   96   III: 5778632-5778727 Caenorhabditis elegans
Exon90060   389   III: 5781815-5782203 Caenorhabditis elegans
Exon90076   326   III: 5790325-5790650 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37B11A.2a.1 5774679 5790650 -1

1 Sequence

Length
3978

1 Sequence Ontology Term

Identifier Name Description
transcript