WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37B11A.2b.1 Sequence Name  Y37B11A.2b.1
Length (nt)  3060   Chromosome Location  III: 5774745-5778545
Chromosome . Primary Identifier  III Chromosome Location . Start  5774745
Chromosome Location . End  5778545 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37B11A.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021344 rev-3 Y37B11A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37B11A.2b Y37B11A.2b 3060   III: 5774745-5774905

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37B11A.2b.1 5774745 5778545 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90038   161   III: 5774745-5774905 Caenorhabditis elegans
Exon90040   113   III: 5774952-5775064 Caenorhabditis elegans
Exon90042   255   III: 5775114-5775368 Caenorhabditis elegans
Exon90044   535   III: 5775415-5775949 Caenorhabditis elegans
Exon90046   163   III: 5776161-5776323 Caenorhabditis elegans
Exon90048   114   III: 5776368-5776481 Caenorhabditis elegans
Exon90050   226   III: 5776527-5776752 Caenorhabditis elegans
Exon90052   225   III: 5776795-5777019 Caenorhabditis elegans
Exon90054   512   III: 5777185-5777696 Caenorhabditis elegans
Exon90056   322   III: 5777744-5778065 Caenorhabditis elegans
Exon90057   434   III: 5778112-5778545 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37B11A.2b.1 5774745 5778545 -1

1 Sequence

Length
3060

1 Sequence Ontology Term

Identifier Name Description
transcript