WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03A3.2.1 Sequence Name  W03A3.2.1
Length (nt)  5090   Chromosome Location  III: 5791119-5803160
Chromosome . Primary Identifier  III Chromosome Location . Start  5791119
Chromosome Location . End  5803160 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03A3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020964 polq-1 W03A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03A3.2 W03A3.2 4812   III: 5791279-5791460

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03A3.2.1 5791119 5803160 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90077   342   III: 5791119-5791460 Caenorhabditis elegans
Exon90078   210   III: 5791839-5792048 Caenorhabditis elegans
Exon90079   334   III: 5792100-5792433 Caenorhabditis elegans
Exon90080   669   III: 5792555-5793223 Caenorhabditis elegans
Exon90081   158   III: 5793279-5793436 Caenorhabditis elegans
Exon90082   229   III: 5793701-5793929 Caenorhabditis elegans
Exon90083   104   III: 5793976-5794079 Caenorhabditis elegans
Exon90084   758   III: 5794306-5795063 Caenorhabditis elegans
Exon90085   105   III: 5796085-5796189 Caenorhabditis elegans
Exon90086   139   III: 5796620-5796758 Caenorhabditis elegans
Exon90087   70   III: 5796892-5796961 Caenorhabditis elegans
Exon90088   234   III: 5797152-5797385 Caenorhabditis elegans
Exon90089   288   III: 5797721-5798008 Caenorhabditis elegans
Exon90090   134   III: 5798430-5798563 Caenorhabditis elegans
Exon90096   123   III: 5801223-5801345 Caenorhabditis elegans
Exon90097   645   III: 5801816-5802460 Caenorhabditis elegans
Exon90098   237   III: 5802511-5802747 Caenorhabditis elegans
Exon90099   124   III: 5802800-5802923 Caenorhabditis elegans
Exon90100   187   III: 5802974-5803160 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03A3.2.1 5791119 5803160 -1

1 Sequence

Length
5090

1 Sequence Ontology Term

Identifier Name Description
transcript