WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R12B2.1b Sequence Name  R12B2.1b
Length (nt)  570   Chromosome Location  III: 5819047-5819132
Chromosome . Primary Identifier  III Chromosome Location . Start  5819047
Chromosome Location . End  5819132
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12B2.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39618 SMA-4, isoform b 21.2 189 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00009064
WBRNAi00026094
WBRNAi00051828
WBRNAi00086336
WBRNAi00086337
WBRNAi00113601
WBRNAi00005142
WBRNAi00086330
WBRNAi00086331
WBRNAi00027660
WBRNAi00086338
WBRNAi00086339
WBRNAi00097939
WBRNAi00097940
WBRNAi00086324
WBRNAi00086325
WBRNAi00075970

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R12B2.1b 5819047 5819132 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004858 sma-4 R12B2.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:R12B2.1b 5819047 5819132 1
CDS:R12B2.1b 5819181 5819346 1
CDS:R12B2.1b 5819392 5819493 1
CDS:R12B2.1b 5819802 5819924 1
CDS:R12B2.1b 5819973 5820065 1

1 Sequence

Length
570

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R12B2.1b.1 R12B2.1b.1 570   III: 5819047-5820065