WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F01F1.7 Sequence Name  F01F1.7
Length (nt)  2193   Chromosome Location  III: 5848944-5849066
Chromosome . Primary Identifier  III Chromosome Location . Start  5848944
Chromosome Location . End  5849066
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01F1.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26887 DDX-23 84.8 730 Caenorhabditis elegans
 

Other

59 RNAi

WormBase ID
WBRNAi00043758
WBRNAi00075234
WBRNAi00099847
WBRNAi00083576
WBRNAi00083681
WBRNAi00083771
WBRNAi00075488
WBRNAi00100762
WBRNAi00099241
WBRNAi00099645
WBRNAi00099443
WBRNAi00075235
WBRNAi00002483
WBRNAi00007823
WBRNAi00008596
WBRNAi00024996
WBRNAi00075487
WBRNAi00080061
WBRNAi00087043
WBRNAi00087045
WBRNAi00087044
WBRNAi00100014
WBRNAi00080145
WBRNAi00100388
WBRNAi00100201
WBRNAi00087046
WBRNAi00087208
WBRNAi00083534
WBRNAi00100949
WBRNAi00100575

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F01F1.7 5848944 5849066 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017162 ddx-23 F01F1.7 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F01F1.7 5848944 5849066 -1
CDS:F01F1.7 5849731 5849807 -1
CDS:F01F1.7 5850103 5850189 -1
CDS:F01F1.7 5850864 5851119 -1
CDS:F01F1.7 5851541 5853118 -1
CDS:F01F1.7 5853192 5853263 -1

1 Sequence

Length
2193

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F01F1.7.1 F01F1.7.1 2305   III: 5848838-5853269