WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01F1.9b.1 Sequence Name  F01F1.9b.1
Length (nt)  1549   Chromosome Location  III: 5861855-5863546
Chromosome . Primary Identifier  III Chromosome Location . Start  5861855
Chromosome Location . End  5863546 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01F1.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017163 dnpp-1 F01F1.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01F1.9b F01F1.9b 1413   III: 5861991-5862084

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.9b.1 5861855 5863546 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90241   230   III: 5861855-5862084 Caenorhabditis elegans
Exon90243   807   III: 5862132-5862938 Caenorhabditis elegans
Exon90245   418   III: 5862988-5863405 Caenorhabditis elegans
Exon90247   94   III: 5863453-5863546 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.9b.1 5861855 5863546 -1

1 Sequence

Length
1549

1 Sequence Ontology Term

Identifier Name Description
transcript