WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01F1.10a.1 Sequence Name  F01F1.10a.1
Length (nt)  1192   Chromosome Location  III: 5866657-5868501
Chromosome . Primary Identifier  III Chromosome Location . Start  5866657
Chromosome Location . End  5868501 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01F1.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017164 eng-1 F01F1.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01F1.10a F01F1.10a 885   III: 5867192-5867453

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.10a.1 5866657 5868501 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90256   100   III: 5866657-5866756 Caenorhabditis elegans
Exon90257   204   III: 5866803-5867006 Caenorhabditis elegans
Exon90260   263   III: 5867191-5867453 Caenorhabditis elegans
Exon90263   319   III: 5867496-5867814 Caenorhabditis elegans
Exon90266   206   III: 5867902-5868107 Caenorhabditis elegans
Exon90270   100   III: 5868402-5868501 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.10a.1 5866657 5868501 -1

1 Sequence

Length
1192

1 Sequence Ontology Term

Identifier Name Description
transcript