WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01F1.2.1 Sequence Name  F01F1.2.1
Length (nt)  690   Chromosome Location  III: 5878554-5879415
Chromosome . Primary Identifier  III Chromosome Location . Start  5878554
Chromosome Location . End  5879415 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01F1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017159 F01F1.2 F01F1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01F1.2 F01F1.2 486   III: 5878559-5878703

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.2.1 5878554 5879415 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90312   150   III: 5878554-5878703 Caenorhabditis elegans
Exon90313   105   III: 5878760-5878864 Caenorhabditis elegans
Exon90314   94   III: 5878936-5879029 Caenorhabditis elegans
Exon90315   341   III: 5879075-5879415 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.2.1 5878554 5879415 1

1 Sequence

Length
690

1 Sequence Ontology Term

Identifier Name Description
transcript