WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01F1.1b.1 Sequence Name  F01F1.1b.1
Length (nt)  1494   Chromosome Location  III: 5879489-5882430
Chromosome . Primary Identifier  III Chromosome Location . Start  5879489
Chromosome Location . End  5882430 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01F1.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017158 hpo-10 F01F1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01F1.1b F01F1.1b 174   III: 5879611-5879615

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.1b.1 5879489 5882430 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90324   127   III: 5879489-5879615 Caenorhabditis elegans
Exon90328   85   III: 5879845-5879929 Caenorhabditis elegans
Exon90331   55   III: 5879979-5880033 Caenorhabditis elegans
Exon90340   132   III: 5881053-5881184 Caenorhabditis elegans
Exon90346   144   III: 5881231-5881374 Caenorhabditis elegans
Exon90350   462   III: 5881429-5881890 Caenorhabditis elegans
Exon90358   489   III: 5881942-5882430 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.1b.1 5879489 5882430 1

1 Sequence

Length
1494

1 Sequence Ontology Term

Identifier Name Description
transcript