WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01F1.13.1 Sequence Name  F01F1.13.1
Length (nt)  1143   Chromosome Location  III: 5876947-5878380
Chromosome . Primary Identifier  III Chromosome Location . Start  5876947
Chromosome Location . End  5878380 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01F1.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003252 mig-21 F01F1.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01F1.13 F01F1.13 942   III: 5877020-5877333

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.13.1 5876947 5878380 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90343   387   III: 5876947-5877333 Caenorhabditis elegans
Exon90344   99   III: 5877476-5877574 Caenorhabditis elegans
Exon90345   119   III: 5877631-5877749 Caenorhabditis elegans
Exon90346   245   III: 5877794-5878038 Caenorhabditis elegans
Exon90347   293   III: 5878088-5878380 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.13.1 5876947 5878380 -1

1 Sequence

Length
1143

1 Sequence Ontology Term

Identifier Name Description
transcript