WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C28H8.6b.1 Sequence Name  C28H8.6b.1
Length (nt)  920   Chromosome Location  III: 5889721-5894292
Chromosome . Primary Identifier  III Chromosome Location . Start  5889721
Chromosome Location . End  5894292 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28H8.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016197 pxl-1 C28H8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C28H8.6b C28H8.6b 771   III: 5889806-5889874

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C28H8.6b.1 5889721 5894292 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90376   154   III: 5889721-5889874 Caenorhabditis elegans
Exon90380   135   III: 5891324-5891458 Caenorhabditis elegans
Exon90383   96   III: 5891507-5891602 Caenorhabditis elegans
Exon90386   174   III: 5891845-5892018 Caenorhabditis elegans
Exon90389   147   III: 5892278-5892424 Caenorhabditis elegans
Exon90393   214   III: 5894079-5894292 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C28H8.6b.1 5889721 5894292 -1

1 Sequence

Length
920

1 Sequence Ontology Term

Identifier Name Description
transcript