WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C28H8.6c Sequence Name  C28H8.6c
Length (nt)  1059   Chromosome Location  III: 5890399-5890677
Chromosome . Primary Identifier  III Chromosome Location . Start  5890399
Chromosome Location . End  5890677
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28H8.6c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41531 PXL-1, isoform c 39.6 352 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00041432
WBRNAi00109207
WBRNAi00109574
WBRNAi00029305
WBRNAi00109185
WBRNAi00110533
WBRNAi00024664
WBRNAi00002509
WBRNAi00008457
WBRNAi00111893
WBRNAi00109283
WBRNAi00109477
WBRNAi00110532
WBRNAi00110534
WBRNAi00109380

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C28H8.6c 5890399 5890677 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016197 pxl-1 C28H8.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C28H8.6c 5890399 5890677 -1
CDS:C28H8.6c 5891324 5891458 -1
CDS:C28H8.6c 5891507 5891602 -1
CDS:C28H8.6c 5891845 5892018 -1
CDS:C28H8.6c 5892278 5892424 -1
CDS:C28H8.6c 5894079 5894130 -1
CDS:C28H8.6c 5895550 5895679 -1
CDS:C28H8.6c 5895961 5896006 -1

1 Sequence

Length
1059

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C28H8.6c.1 C28H8.6c.1 1192   III: 5890273-5896013