WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C28H8.4 Sequence Name  C28H8.4
Length (nt)  642   Chromosome Location  III: 5907058-5907249
Chromosome . Primary Identifier  III Chromosome Location . Start  5907058
Chromosome Location . End  5907249
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28H8.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01826 ERD-2.2 24.7 213 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00041430
WBRNAi00011313
WBRNAi00090896
WBRNAi00005473
WBRNAi00086442
WBRNAi00086443
WBRNAi00029303
WBRNAi00086440
WBRNAi00117190
WBRNAi00117189

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C28H8.4 5907058 5907249 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016195 erd-2.2 C28H8.4 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:C28H8.4 5907058 5907249 1
CDS:C28H8.4 5907294 5907536 1
CDS:C28H8.4 5907984 5908190 1

1 Sequence

Length
642

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C28H8.4.2 C28H8.4.2 677   III: 5907049-5908235
Transcript:C28H8.4.1 C28H8.4.1 918   III: 5907049-5908457