WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C28H8.3.1 Sequence Name  C28H8.3.1
Length (nt)  5451   Chromosome Location  III: 5908700-5914729
Chromosome . Primary Identifier  III Chromosome Location . Start  5908700
Chromosome Location . End  5914729 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28H8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016194 C28H8.3 C28H8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C28H8.3 C28H8.3 5145   III: 5908761-5908791

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C28H8.3.1 5908700 5914729 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90426   92   III: 5908700-5908791 Caenorhabditis elegans
Exon90427   711   III: 5908838-5909548 Caenorhabditis elegans
Exon90428   443   III: 5909595-5910037 Caenorhabditis elegans
Exon90429   1347   III: 5910086-5911432 Caenorhabditis elegans
Exon90430   224   III: 5911477-5911700 Caenorhabditis elegans
Exon90431   402   III: 5911750-5912151 Caenorhabditis elegans
Exon90432   939   III: 5912199-5913137 Caenorhabditis elegans
Exon90433   643   III: 5913222-5913864 Caenorhabditis elegans
Exon90434   267   III: 5913945-5914211 Caenorhabditis elegans
Exon90435   383   III: 5914347-5914729 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C28H8.3.1 5908700 5914729 1

1 Sequence

Length
5451

1 Sequence Ontology Term

Identifier Name Description
transcript