WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C28H8.11a Sequence Name  C28H8.11a
Length (nt)  1212   Chromosome Location  III: 5917710-5917948
Chromosome . Primary Identifier  III Chromosome Location . Start  5917710
Chromosome Location . End  5917948
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28H8.11a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01822 TDO-2, isoform a 46.7 403 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00041426
WBRNAi00011310
WBRNAi00005315
WBRNAi00024663
WBRNAi00027193
WBRNAi00064449

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C28H8.11a 5917710 5917948 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016201 tdo-2 C28H8.11 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C28H8.11a 5917710 5917948 -1
CDS:C28H8.11a 5918162 5918299 -1
CDS:C28H8.11a 5918485 5918599 -1
CDS:C28H8.11a 5918826 5919035 -1
CDS:C28H8.11a 5919173 5919391 -1
CDS:C28H8.11a 5919505 5919663 -1
CDS:C28H8.11a 5919820 5919951 -1

1 Sequence

Length
1212

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C28H8.11a.1 C28H8.11a.1 1298   III: 5917628-5919955