WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25B5.3e.1 Sequence Name  F25B5.3e.1
Length (nt)  1496   Chromosome Location  III: 5948901-5953531
Chromosome . Primary Identifier  III Chromosome Location . Start  5948901
Chromosome Location . End  5953531 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B5.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017775 F25B5.3 F25B5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25B5.3e F25B5.3e 162   III: 5948901-5948991

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25B5.3e.1 5948901 5953531 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90529   91   III: 5948901-5948991 Caenorhabditis elegans
Exon90530   55   III: 5950284-5950338 Caenorhabditis elegans
Exon90536   820   III: 5952041-5952860 Caenorhabditis elegans
Exon90542   103   III: 5952909-5953011 Caenorhabditis elegans
Exon90545   427   III: 5953105-5953531 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25B5.3e.1 5948901 5953531 1

1 Sequence

Length
1496

1 Sequence Ontology Term

Identifier Name Description
transcript