WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25B5.7c.1 Sequence Name  F25B5.7c.1
Length (nt)  849   Chromosome Location  III: 5953710-5955916
Chromosome . Primary Identifier  III Chromosome Location . Start  5953710
Chromosome Location . End  5955916 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B5.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017778 nono-1 F25B5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25B5.7c F25B5.7c 849   III: 5953710-5953804

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25B5.7c.1 5953710 5955916 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90549   95   III: 5953710-5953804 Caenorhabditis elegans
Exon90551   528   III: 5953868-5954395 Caenorhabditis elegans
Exon90555   197   III: 5955097-5955293 Caenorhabditis elegans
Exon90556   29   III: 5955888-5955916 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25B5.7c.1 5953710 5955916 -1

1 Sequence

Length
849

1 Sequence Ontology Term

Identifier Name Description
transcript