WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25B5.1b.1 Sequence Name  F25B5.1b.1
Length (nt)  2982   Chromosome Location  III: 5966413-5971511
Chromosome . Primary Identifier  III Chromosome Location . Start  5966413
Chromosome Location . End  5971511 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017773 dct-6 F25B5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25B5.1b F25B5.1b 2772   III: 5966416-5966456

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25B5.1b.1 5966413 5971511 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90612   44   III: 5966413-5966456 Caenorhabditis elegans
Exon90614   89   III: 5966595-5966683 Caenorhabditis elegans
Exon90616   287   III: 5966729-5967015 Caenorhabditis elegans
Exon90618   98   III: 5967065-5967162 Caenorhabditis elegans
Exon90620   346   III: 5967372-5967717 Caenorhabditis elegans
Exon90624   503   III: 5968113-5968615 Caenorhabditis elegans
Exon90626   123   III: 5968774-5968896 Caenorhabditis elegans
Exon90627   24   III: 5968973-5968996 Caenorhabditis elegans
Exon90629   88   III: 5969231-5969318 Caenorhabditis elegans
Exon90631   346   III: 5969567-5969912 Caenorhabditis elegans
Exon90633   251   III: 5970180-5970430 Caenorhabditis elegans
Exon90635   289   III: 5970501-5970789 Caenorhabditis elegans
Exon90637   116   III: 5970835-5970950 Caenorhabditis elegans
Exon90639   378   III: 5971134-5971511 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25B5.1b.1 5966413 5971511 1

1 Sequence

Length
2982

1 Sequence Ontology Term

Identifier Name Description
transcript