WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F25B5.1a Sequence Name  F25B5.1a
Length (nt)  2748   Chromosome Location  III: 5966416-5966456
Chromosome . Primary Identifier  III Chromosome Location . Start  5966416
Chromosome Location . End  5966456
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B5.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39493 DCT-6, isoform a 103.5 915 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00001232
WBRNAi00045473
WBRNAi00013851
WBRNAi00005552
WBRNAi00103308

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F25B5.1a 5966416 5966456 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017773 dct-6 F25B5.1 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:F25B5.1a 5966416 5966456 1
CDS:F25B5.1a 5966595 5966683 1
CDS:F25B5.1a 5966729 5967015 1
CDS:F25B5.1a 5967065 5967162 1
CDS:F25B5.1a 5967372 5967717 1
CDS:F25B5.1a 5968113 5968615 1
CDS:F25B5.1a 5968774 5968896 1
CDS:F25B5.1a 5969231 5969318 1
CDS:F25B5.1a 5969567 5969912 1
CDS:F25B5.1a 5970180 5970430 1
CDS:F25B5.1a 5970501 5970789 1
CDS:F25B5.1a 5970835 5970950 1
CDS:F25B5.1a 5971134 5971304 1

1 Sequence

Length
2748

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25B5.1a.1 F25B5.1a.1 2957   III: 5966413-5971510