WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04C9.6b.1 Sequence Name  T04C9.6b.1
Length (nt)  1770   Chromosome Location  III: 5976856-5981316
Chromosome . Primary Identifier  III Chromosome Location . Start  5976856
Chromosome Location . End  5981316 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04C9.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001489 frm-2 T04C9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04C9.6b T04C9.6b 1770   III: 5976856-5976948

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04C9.6b.1 5976856 5981316 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90667   93   III: 5976856-5976948 Caenorhabditis elegans
Exon90672   435   III: 5977005-5977439 Caenorhabditis elegans
Exon90677   339   III: 5977676-5978014 Caenorhabditis elegans
Exon90682   250   III: 5978123-5978372 Caenorhabditis elegans
Exon90687   121   III: 5978869-5978989 Caenorhabditis elegans
Exon90692   98   III: 5979046-5979143 Caenorhabditis elegans
Exon90697   125   III: 5979189-5979313 Caenorhabditis elegans
Exon90702   105   III: 5979369-5979473 Caenorhabditis elegans
Exon90706   156   III: 5979708-5979863 Caenorhabditis elegans
Exon90710   48   III: 5981269-5981316 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04C9.6b.1 5976856 5981316 -1

1 Sequence

Length
1770

1 Sequence Ontology Term

Identifier Name Description
transcript