WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04C9.1b.1 Sequence Name  T04C9.1b.1
Length (nt)  3267   Chromosome Location  III: 5993213-6006369
Chromosome . Primary Identifier  III Chromosome Location . Start  5993213
Chromosome Location . End  6006369 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04C9.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020209 T04C9.1 T04C9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04C9.1b T04C9.1b 2592   III: 5993274-5993427

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04C9.1b.1 5993213 6006369 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90720   215   III: 5993213-5993427 Caenorhabditis elegans
Exon90723   96   III: 5993505-5993600 Caenorhabditis elegans
Exon90725   290   III: 5994186-5994475 Caenorhabditis elegans
Exon90727   100   III: 5994885-5994984 Caenorhabditis elegans
Exon90729   62   III: 5995390-5995451 Caenorhabditis elegans
Exon90731   75   III: 5995502-5995576 Caenorhabditis elegans
Exon90733   79   III: 5995636-5995714 Caenorhabditis elegans
Exon90735   193   III: 5996270-5996462 Caenorhabditis elegans
Exon90738   158   III: 5997277-5997434 Caenorhabditis elegans
Exon90741   232   III: 6003151-6003382 Caenorhabditis elegans
Exon90743   431   III: 6003432-6003862 Caenorhabditis elegans
Exon90746   351   III: 6003917-6004267 Caenorhabditis elegans
Exon90749   52   III: 6004590-6004641 Caenorhabditis elegans
Exon90752   144   III: 6004805-6004948 Caenorhabditis elegans
Exon90754   83   III: 6005251-6005333 Caenorhabditis elegans
Exon90757   706   III: 6005664-6006369 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04C9.1b.1 5993213 6006369 1

1 Sequence

Length
3267

1 Sequence Ontology Term

Identifier Name Description
transcript