WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK328.5b.1 Sequence Name  ZK328.5b.1
Length (nt)  5377   Chromosome Location  III: 6013447-6019562
Chromosome . Primary Identifier  III Chromosome Location . Start  6013447
Chromosome Location . End  6019562 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK328.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003796 npp-10 ZK328.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK328.5b ZK328.5b 5037   III: 6013773-6013932

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK328.5b.1 6013447 6019562 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90771   486   III: 6013447-6013932 Caenorhabditis elegans
Exon90772   456   III: 6013983-6014438 Caenorhabditis elegans
Exon90773   998   III: 6014486-6015483 Caenorhabditis elegans
Exon90774   492   III: 6015606-6016097 Caenorhabditis elegans
Exon90777   87   III: 6016383-6016469 Caenorhabditis elegans
Exon90779   1746   III: 6016518-6018263 Caenorhabditis elegans
Exon90782   227   III: 6018309-6018535 Caenorhabditis elegans
Exon90785   456   III: 6018582-6019037 Caenorhabditis elegans
Exon90789   201   III: 6019086-6019286 Caenorhabditis elegans
Exon90792   228   III: 6019335-6019562 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK328.5b.1 6013447 6019562 -1

1 Sequence

Length
5377

1 Sequence Ontology Term

Identifier Name Description
transcript