WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK328.1b.1 Sequence Name  ZK328.1b.1
Length (nt)  3830   Chromosome Location  III: 6020159-6024659
Chromosome . Primary Identifier  III Chromosome Location . Start  6020159
Chromosome Location . End  6024659 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK328.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000874 cyk-3 ZK328.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK328.1b ZK328.1b 3537   III: 6020212-6020284

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK328.1b.1 6020159 6024659 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90794   126   III: 6020159-6020284 Caenorhabditis elegans
Exon90797   71   III: 6020332-6020402 Caenorhabditis elegans
Exon90799   154   III: 6020443-6020596 Caenorhabditis elegans
Exon90801   117   III: 6020645-6020761 Caenorhabditis elegans
Exon90803   237   III: 6020811-6021047 Caenorhabditis elegans
Exon90805   265   III: 6021094-6021358 Caenorhabditis elegans
Exon90807   163   III: 6021405-6021567 Caenorhabditis elegans
Exon90809   604   III: 6021614-6022217 Caenorhabditis elegans
Exon90810   251   III: 6022333-6022583 Caenorhabditis elegans
Exon90813   403   III: 6022631-6023033 Caenorhabditis elegans
Exon90815   884   III: 6023078-6023961 Caenorhabditis elegans
Exon90817   150   III: 6024009-6024158 Caenorhabditis elegans
Exon90819   93   III: 6024208-6024300 Caenorhabditis elegans
Exon90820   312   III: 6024348-6024659 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK328.1b.1 6020159 6024659 1

1 Sequence

Length
3830

1 Sequence Ontology Term

Identifier Name Description
transcript