WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK328.1a.1 Sequence Name  ZK328.1a.1
Length (nt)  4141   Chromosome Location  III: 6020165-6024985
Chromosome . Primary Identifier  III Chromosome Location . Start  6020165
Chromosome Location . End  6024985 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK328.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000874 cyk-3 ZK328.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK328.1a ZK328.1a 3528   III: 6020212-6020284

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK328.1a.1 6020165 6024985 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90802   120   III: 6020165-6020284 Caenorhabditis elegans
Exon90803   71   III: 6020332-6020402 Caenorhabditis elegans
Exon90805   154   III: 6020443-6020596 Caenorhabditis elegans
Exon90807   117   III: 6020645-6020761 Caenorhabditis elegans
Exon90809   237   III: 6020811-6021047 Caenorhabditis elegans
Exon90811   265   III: 6021094-6021358 Caenorhabditis elegans
Exon90813   163   III: 6021405-6021567 Caenorhabditis elegans
Exon90815   604   III: 6021614-6022217 Caenorhabditis elegans
Exon90818   242   III: 6022342-6022583 Caenorhabditis elegans
Exon90819   403   III: 6022631-6023033 Caenorhabditis elegans
Exon90821   884   III: 6023078-6023961 Caenorhabditis elegans
Exon90823   150   III: 6024009-6024158 Caenorhabditis elegans
Exon90825   93   III: 6024208-6024300 Caenorhabditis elegans
Exon90828   638   III: 6024348-6024985 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK328.1a.1 6020165 6024985 1

1 Sequence

Length
4141

1 Sequence Ontology Term

Identifier Name Description
transcript