WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK328.7a.1 Sequence Name  ZK328.7a.1
Length (nt)  4192   Chromosome Location  III: 6032563-6039470
Chromosome . Primary Identifier  III Chromosome Location . Start  6032563
Chromosome Location . End  6039470 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK328.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022696 ift-139 ZK328.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK328.7a ZK328.7a 3975   III: 6032743-6032888

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK328.7a.1 6032563 6039470 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90840   326   III: 6032563-6032888 Caenorhabditis elegans
Exon90841   536   III: 6032947-6033482 Caenorhabditis elegans
Exon90843   234   III: 6033810-6034043 Caenorhabditis elegans
Exon90844   79   III: 6034096-6034174 Caenorhabditis elegans
Exon90846   82   III: 6034223-6034304 Caenorhabditis elegans
Exon90848   283   III: 6034349-6034631 Caenorhabditis elegans
Exon90850   432   III: 6034679-6035110 Caenorhabditis elegans
Exon90852   239   III: 6035160-6035398 Caenorhabditis elegans
Exon90854   699   III: 6035453-6036151 Caenorhabditis elegans
Exon90856   253   III: 6036270-6036522 Caenorhabditis elegans
Exon90858   390   III: 6036571-6036960 Caenorhabditis elegans
Exon90860   185   III: 6038452-6038636 Caenorhabditis elegans
Exon90862   92   III: 6038681-6038772 Caenorhabditis elegans
Exon90864   215   III: 6038830-6039044 Caenorhabditis elegans
Exon90867   147   III: 6039324-6039470 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK328.7a.1 6032563 6039470 -1

1 Sequence

Length
4192

1 Sequence Ontology Term

Identifier Name Description
transcript