WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40H6.5.1 Sequence Name  F40H6.5.1
Length (nt)  3690   Chromosome Location  III: 6048909-6055806
Chromosome . Primary Identifier  III Chromosome Location . Start  6048909
Chromosome Location . End  6055806 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40H6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018255 F40H6.5 F40H6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40H6.5 F40H6.5 3690   III: 6048909-6049002

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40H6.5.1 6048909 6055806 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90880   94   III: 6048909-6049002 Caenorhabditis elegans
Exon90881   204   III: 6049320-6049523 Caenorhabditis elegans
Exon90882   82   III: 6049636-6049717 Caenorhabditis elegans
Exon90883   137   III: 6049835-6049971 Caenorhabditis elegans
Exon90884   135   III: 6050322-6050456 Caenorhabditis elegans
Exon90885   71   III: 6050502-6050572 Caenorhabditis elegans
Exon90886   115   III: 6050622-6050736 Caenorhabditis elegans
Exon90887   104   III: 6050782-6050885 Caenorhabditis elegans
Exon90888   313   III: 6050980-6051292 Caenorhabditis elegans
Exon90889   135   III: 6051355-6051489 Caenorhabditis elegans
Exon90890   77   III: 6051535-6051611 Caenorhabditis elegans
Exon90891   112   III: 6051654-6051765 Caenorhabditis elegans
Exon90892   104   III: 6052651-6052754 Caenorhabditis elegans
Exon90893   447   III: 6052799-6053245 Caenorhabditis elegans
Exon90894   543   III: 6053598-6054140 Caenorhabditis elegans
Exon90895   424   III: 6054560-6054983 Caenorhabditis elegans
Exon90896   145   III: 6055038-6055182 Caenorhabditis elegans
Exon90897   258   III: 6055232-6055489 Caenorhabditis elegans
Exon90898   139   III: 6055572-6055710 Caenorhabditis elegans
Exon90899   51   III: 6055756-6055806 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40H6.5.1 6048909 6055806 -1

1 Sequence

Length
3690

1 Sequence Ontology Term

Identifier Name Description
transcript