WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D10.2a.1 Sequence Name  C05D10.2a.1
Length (nt)  1741   Chromosome Location  III: 6067857-6072086
Chromosome . Primary Identifier  III Chromosome Location . Start  6067857
Chromosome Location . End  6072086 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D10.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015478 mapk-15 C05D10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D10.2a C05D10.2a 1413   III: 6067891-6067938

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05D10.2a.1 6067857 6072086 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90911   82   III: 6067857-6067938 Caenorhabditis elegans
Exon90914   81   III: 6068322-6068402 Caenorhabditis elegans
Exon90917   128   III: 6068447-6068574 Caenorhabditis elegans
Exon90920   150   III: 6068768-6068917 Caenorhabditis elegans
Exon90923   85   III: 6069844-6069928 Caenorhabditis elegans
Exon90926   157   III: 6070027-6070183 Caenorhabditis elegans
Exon90929   205   III: 6070231-6070435 Caenorhabditis elegans
Exon90932   232   III: 6070580-6070811 Caenorhabditis elegans
Exon90935   145   III: 6070965-6071109 Caenorhabditis elegans
Exon90940   476   III: 6071611-6072086 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05D10.2a.1 6067857 6072086 1

1 Sequence

Length
1741

1 Sequence Ontology Term

Identifier Name Description
transcript