WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C05D10.1a Sequence Name  C05D10.1a
Length (nt)  1590   Chromosome Location  III: 6080576-6080674
Chromosome . Primary Identifier  III Chromosome Location . Start  6080576
Chromosome Location . End  6080674
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D10.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24783 ATTF-4, isoform a 56.9 529 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00039719
WBRNAi00010192
WBRNAi00005561
WBRNAi00028487

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C05D10.1a 6080576 6080674 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015477 attf-4 C05D10.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C05D10.1a 6080576 6080674 1
CDS:C05D10.1a 6082165 6082269 1
CDS:C05D10.1a 6082791 6083223 1
CDS:C05D10.1a 6083273 6083482 1
CDS:C05D10.1a 6083626 6084210 1
CDS:C05D10.1a 6084273 6084430 1

1 Sequence

Length
1590

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C05D10.1a.1 C05D10.1a.1 1921   III: 6080563-6084748