WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D10.1c.1 Sequence Name  C05D10.1c.1
Length (nt)  1374   Chromosome Location  III: 6082803-6084430
Chromosome . Primary Identifier  III Chromosome Location . Start  6082803
Chromosome Location . End  6084430 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D10.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015477 attf-4 C05D10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D10.1c C05D10.1c 1374   III: 6082803-6083223

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05D10.1c.1 6082803 6084430 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90946   421   III: 6082803-6083223 Caenorhabditis elegans
Exon90949   210   III: 6083273-6083482 Caenorhabditis elegans
Exon90952   585   III: 6083626-6084210 Caenorhabditis elegans
Exon90953   158   III: 6084273-6084430 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05D10.1c.1 6082803 6084430 1

1 Sequence

Length
1374

1 Sequence Ontology Term

Identifier Name Description
transcript