WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D10.4b.1 Sequence Name  C05D10.4b.1
Length (nt)  1882   Chromosome Location  III: 6088683-6095542
Chromosome . Primary Identifier  III Chromosome Location . Start  6088683
Chromosome Location . End  6095542 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D10.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015480 C05D10.4 C05D10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D10.4b C05D10.4b 1659   III: 6088906-6088959

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05D10.4b.1 6088683 6095542 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90977   277   III: 6088683-6088959 Caenorhabditis elegans
Exon90981   145   III: 6089012-6089156 Caenorhabditis elegans
Exon90984   119   III: 6089203-6089321 Caenorhabditis elegans
Exon90987   152   III: 6089375-6089526 Caenorhabditis elegans
Exon90990   263   III: 6089583-6089845 Caenorhabditis elegans
Exon90993   109   III: 6089932-6090040 Caenorhabditis elegans
Exon90996   359   III: 6090476-6090834 Caenorhabditis elegans
Exon91000   170   III: 6090889-6091058 Caenorhabditis elegans
Exon91003   52   III: 6094115-6094166 Caenorhabditis elegans
Exon91006   126   III: 6094621-6094746 Caenorhabditis elegans
Exon91007   110   III: 6095433-6095542 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05D10.4b.1 6088683 6095542 -1

1 Sequence

Length
1882

1 Sequence Ontology Term

Identifier Name Description
transcript