WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y42G9A.4r.11 Sequence Name  Y42G9A.4r.11
Length (nt)  1283   Chromosome Location  III: 6124041-6126818
Chromosome . Primary Identifier  III Chromosome Location . Start  6124041
Chromosome Location . End  6126818 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42G9A.4r.11

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021534 mvk-1 Y42G9A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42G9A.4r Y42G9A.4r 225   III: 6124845-6125020

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y42G9A.4r.11 6124041 6126818 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91045   980   III: 6124041-6125020 Caenorhabditis elegans
Exon91095   154   III: 6125493-6125646 Caenorhabditis elegans
Exon91130   149   III: 6126670-6126818 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y42G9A.4r.11 6124041 6126818 -1

1 Sequence

Length
1283

1 Sequence Ontology Term

Identifier Name Description
transcript