WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y42G9A.4r.7 Sequence Name  Y42G9A.4r.7
Length (nt)  2290   Chromosome Location  III: 6124160-6136271
Chromosome . Primary Identifier  III Chromosome Location . Start  6124160
Chromosome Location . End  6136271 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42G9A.4r.7

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021534 mvk-1 Y42G9A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42G9A.4r Y42G9A.4r 225   III: 6124845-6125020

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y42G9A.4r.7 6124160 6136271 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91055   861   III: 6124160-6125020 Caenorhabditis elegans
Exon91101   154   III: 6125493-6125646 Caenorhabditis elegans
Exon91156   60   III: 6127038-6127097 Caenorhabditis elegans
Exon91184   214   III: 6127610-6127823 Caenorhabditis elegans
Exon91211   49   III: 6127873-6127921 Caenorhabditis elegans
Exon91225   63   III: 6128322-6128384 Caenorhabditis elegans
Exon91250   127   III: 6129342-6129468 Caenorhabditis elegans
Exon91277   139   III: 6129912-6130050 Caenorhabditis elegans
Exon91318   305   III: 6130781-6131085 Caenorhabditis elegans
Exon91345   161   III: 6131587-6131747 Caenorhabditis elegans
Exon91365   157   III: 6136115-6136271 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y42G9A.4r.7 6124160 6136271 -1

1 Sequence

Length
2290

1 Sequence Ontology Term

Identifier Name Description
transcript