WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y42G9A.4m.1 Sequence Name  Y42G9A.4m.1
Length (nt)  2791   Chromosome Location  III: 6124180-6133104
Chromosome . Primary Identifier  III Chromosome Location . Start  6124180
Chromosome Location . End  6133104 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42G9A.4m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021534 mvk-1 Y42G9A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42G9A.4m Y42G9A.4m 2124   III: 6124845-6125020

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y42G9A.4m.1 6124180 6133104 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91061   841   III: 6124180-6125020 Caenorhabditis elegans
Exon91088   154   III: 6125493-6125646 Caenorhabditis elegans
Exon91118   135   III: 6126670-6126804 Caenorhabditis elegans
Exon91146   60   III: 6127038-6127097 Caenorhabditis elegans
Exon91174   214   III: 6127610-6127823 Caenorhabditis elegans
Exon91201   49   III: 6127873-6127921 Caenorhabditis elegans
Exon91240   127   III: 6129342-6129468 Caenorhabditis elegans
Exon91267   139   III: 6129912-6130050 Caenorhabditis elegans
Exon91285   279   III: 6130212-6130490 Caenorhabditis elegans
Exon91308   305   III: 6130781-6131085 Caenorhabditis elegans
Exon91338   161   III: 6131587-6131747 Caenorhabditis elegans
Exon91355   327   III: 6132778-6133104 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y42G9A.4m.1 6124180 6133104 -1

1 Sequence

Length
2791

1 Sequence Ontology Term

Identifier Name Description
transcript