WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y42G9A.6a.1 Sequence Name  Y42G9A.6a.1
Length (nt)  2177   Chromosome Location  III: 6141959-6149597
Chromosome . Primary Identifier  III Chromosome Location . Start  6141959
Chromosome Location . End  6149597 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42G9A.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021535 wht-7 Y42G9A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42G9A.6a Y42G9A.6a 2001   III: 6142123-6142295

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y42G9A.6a.1 6141959 6149597 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91375   337   III: 6141959-6142295 Caenorhabditis elegans
Exon91382   439   III: 6142340-6142778 Caenorhabditis elegans
Exon91390   302   III: 6142828-6143129 Caenorhabditis elegans
Exon91398   257   III: 6143177-6143433 Caenorhabditis elegans
Exon91406   170   III: 6143807-6143976 Caenorhabditis elegans
Exon91414   96   III: 6144026-6144121 Caenorhabditis elegans
Exon91424   183   III: 6144169-6144351 Caenorhabditis elegans
Exon91441   128   III: 6149067-6149194 Caenorhabditis elegans
Exon91447   109   III: 6149238-6149346 Caenorhabditis elegans
Exon91455   57   III: 6149393-6149449 Caenorhabditis elegans
Exon91462   99   III: 6149499-6149597 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y42G9A.6a.1 6141959 6149597 -1

1 Sequence

Length
2177

1 Sequence Ontology Term

Identifier Name Description
transcript