WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y42G9A.6b.1 Sequence Name  Y42G9A.6b.1
Length (nt)  1590   Chromosome Location  III: 6142123-6144321
Chromosome . Primary Identifier  III Chromosome Location . Start  6142123
Chromosome Location . End  6144321 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42G9A.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021535 wht-7 Y42G9A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42G9A.6b Y42G9A.6b 1590   III: 6142123-6142295

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y42G9A.6b.1 6142123 6144321 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91377   173   III: 6142123-6142295 Caenorhabditis elegans
Exon91383   439   III: 6142340-6142778 Caenorhabditis elegans
Exon91391   302   III: 6142828-6143129 Caenorhabditis elegans
Exon91399   257   III: 6143177-6143433 Caenorhabditis elegans
Exon91407   170   III: 6143807-6143976 Caenorhabditis elegans
Exon91415   96   III: 6144026-6144121 Caenorhabditis elegans
Exon91422   153   III: 6144169-6144321 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y42G9A.6b.1 6142123 6144321 -1

1 Sequence

Length
1590

1 Sequence Ontology Term

Identifier Name Description
transcript