WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42A10.2b.1 Sequence Name  F42A10.2b.1
Length (nt)  2818   Chromosome Location  III: 6159489-6164585
Chromosome . Primary Identifier  III Chromosome Location . Start  6159489
Chromosome Location . End  6164585 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A10.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003593 nfm-1 F42A10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42A10.2b F42A10.2b 2130   III: 6159879-6160100

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42A10.2b.1 6159489 6164585 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91482   612   III: 6159489-6160100 Caenorhabditis elegans
Exon91485   216   III: 6160231-6160446 Caenorhabditis elegans
Exon91488   219   III: 6160793-6161011 Caenorhabditis elegans
Exon91491   135   III: 6161088-6161222 Caenorhabditis elegans
Exon91494   135   III: 6161270-6161404 Caenorhabditis elegans
Exon91497   303   III: 6161480-6161782 Caenorhabditis elegans
Exon91500   150   III: 6161826-6161975 Caenorhabditis elegans
Exon91503   88   III: 6162077-6162164 Caenorhabditis elegans
Exon91506   271   III: 6162637-6162907 Caenorhabditis elegans
Exon91509   175   III: 6163019-6163193 Caenorhabditis elegans
Exon91511   221   III: 6163399-6163619 Caenorhabditis elegans
Exon91512   293   III: 6164293-6164585 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42A10.2b.1 6159489 6164585 1

1 Sequence

Length
2818

1 Sequence Ontology Term

Identifier Name Description
transcript