WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42A10.9.1 Sequence Name  F42A10.9.1
Length (nt)  602   Chromosome Location  III: 6164573-6171177
Chromosome . Primary Identifier  III Chromosome Location . Start  6164573
Chromosome Location . End  6171177 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A10.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023489 F42A10.9 F42A10.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42A10.9 F42A10.9 471   III: 6164652-6164743

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42A10.9.1 6164573 6171177 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91514   171   III: 6164573-6164743 Caenorhabditis elegans
Exon91515   97   III: 6164803-6164899 Caenorhabditis elegans
Exon91527   99   III: 6168591-6168689 Caenorhabditis elegans
Exon91528   140   III: 6170653-6170792 Caenorhabditis elegans
Exon91529   95   III: 6171083-6171177 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42A10.9.1 6164573 6171177 1

1 Sequence

Length
602

1 Sequence Ontology Term

Identifier Name Description
transcript