WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12A2.7.1 Sequence Name  T12A2.7.1
Length (nt)  884   Chromosome Location  III: 6244672-6245828
Chromosome . Primary Identifier  III Chromosome Location . Start  6244672
Chromosome Location . End  6245828 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12A2.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020441 bcas-2 T12A2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12A2.7 T12A2.7 717   III: 6244830-6244935

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12A2.7.1 6244672 6245828 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91753   264   III: 6244672-6244935 Caenorhabditis elegans
Exon91755   266   III: 6244987-6245252 Caenorhabditis elegans
Exon91756   192   III: 6245327-6245518 Caenorhabditis elegans
Exon91757   90   III: 6245570-6245659 Caenorhabditis elegans
Exon91758   72   III: 6245757-6245828 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12A2.7.1 6244672 6245828 -1

1 Sequence

Length
884

1 Sequence Ontology Term

Identifier Name Description
transcript