WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12A2.8.1 Sequence Name  T12A2.8.1
Length (nt)  1668   Chromosome Location  III: 6245926-6248158
Chromosome . Primary Identifier  III Chromosome Location . Start  6245926
Chromosome Location . End  6248158 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12A2.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020442 gen-1 T12A2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12A2.8 T12A2.8 1305   III: 6246278-6246329

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12A2.8.1 6245926 6248158 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91759   404   III: 6245926-6246329 Caenorhabditis elegans
Exon91760   203   III: 6246489-6246691 Caenorhabditis elegans
Exon91761   184   III: 6246739-6246922 Caenorhabditis elegans
Exon91762   114   III: 6246972-6247085 Caenorhabditis elegans
Exon91763   166   III: 6247137-6247302 Caenorhabditis elegans
Exon91764   235   III: 6247357-6247591 Caenorhabditis elegans
Exon91765   90   III: 6247642-6247731 Caenorhabditis elegans
Exon91766   82   III: 6247786-6247867 Caenorhabditis elegans
Exon91767   91   III: 6247923-6248013 Caenorhabditis elegans
Exon91768   99   III: 6248060-6248158 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12A2.8.1 6245926 6248158 -1

1 Sequence

Length
1668

1 Sequence Ontology Term

Identifier Name Description
transcript