WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47D12.7.1 Sequence Name  F47D12.7.1
Length (nt)  1996   Chromosome Location  III: 6293247-6296022
Chromosome . Primary Identifier  III Chromosome Location . Start  6293247
Chromosome Location . End  6296022 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47D12.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018563 F47D12.7 F47D12.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47D12.7 F47D12.7 1740   III: 6293395-6293514

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47D12.7.1 6293247 6296022 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91888   268   III: 6293247-6293514 Caenorhabditis elegans
Exon91889   295   III: 6293562-6293856 Caenorhabditis elegans
Exon91890   201   III: 6293995-6294195 Caenorhabditis elegans
Exon91891   222   III: 6294262-6294483 Caenorhabditis elegans
Exon91892   91   III: 6294530-6294620 Caenorhabditis elegans
Exon91893   150   III: 6294666-6294815 Caenorhabditis elegans
Exon91894   103   III: 6294862-6294964 Caenorhabditis elegans
Exon91895   89   III: 6295013-6295101 Caenorhabditis elegans
Exon91896   85   III: 6295152-6295236 Caenorhabditis elegans
Exon91897   103   III: 6295276-6295378 Caenorhabditis elegans
Exon91898   95   III: 6295425-6295519 Caenorhabditis elegans
Exon91899   186   III: 6295664-6295849 Caenorhabditis elegans
Exon91900   108   III: 6295915-6296022 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47D12.7.1 6293247 6296022 -1

1 Sequence

Length
1996

1 Sequence Ontology Term

Identifier Name Description
transcript