WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C56G2.4.1 Sequence Name  C56G2.4.1
Length (nt)  1757   Chromosome Location  III: 6331732-6335839
Chromosome . Primary Identifier  III Chromosome Location . Start  6331732
Chromosome Location . End  6335839 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56G2.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016979 C56G2.4 C56G2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C56G2.4 C56G2.4 1617   III: 6331749-6331861

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C56G2.4.1 6331732 6335839 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91980   130   III: 6331732-6331861 Caenorhabditis elegans
Exon91981   117   III: 6332350-6332466 Caenorhabditis elegans
Exon91982   690   III: 6332693-6333382 Caenorhabditis elegans
Exon91983   146   III: 6333836-6333981 Caenorhabditis elegans
Exon91984   119   III: 6334147-6334265 Caenorhabditis elegans
Exon91985   140   III: 6334610-6334749 Caenorhabditis elegans
Exon91988   415   III: 6335425-6335839 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C56G2.4.1 6331732 6335839 1

1 Sequence

Length
1757

1 Sequence Ontology Term

Identifier Name Description
transcript