WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C56G2.7a Sequence Name  C56G2.7a
Length (nt)  1125   Chromosome Location  III: 6340381-6340460
Chromosome . Primary Identifier  III Chromosome Location . Start  6340381
Chromosome Location . End  6340460
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56G2.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30640 RPN-13, isoform a 39.8 374 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00043290
WBRNAi00012474
WBRNAi00005356
WBRNAi00033355
WBRNAi00062176
WBRNAi00111098

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C56G2.7a 6340381 6340460 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016981 rpn-13 C56G2.7 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:C56G2.7a 6340381 6340460 -1
CDS:C56G2.7a 6340833 6340998 -1
CDS:C56G2.7a 6341045 6341923 -1

1 Sequence

Length
1125

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C56G2.7a.1 C56G2.7a.1 1393   III: 6340115-6341925