WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C56G2.1a Sequence Name  C56G2.1a
Length (nt)  2604   Chromosome Location  III: 6353482-6353780
Chromosome . Primary Identifier  III Chromosome Location . Start  6353482
Chromosome Location . End  6353780
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56G2.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24866 AKAP-1, isoform a 96.4 867 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00043283
WBRNAi00043284
WBRNAi00012469
WBRNAi00113512
WBRNAi00005648
WBRNAi00005903
WBRNAi00066188
WBRNAi00000576
WBRNAi00008563
WBRNAi00043285

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C56G2.1a 6353482 6353780 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016977 akap-1 C56G2.1 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:C56G2.1a 6353482 6353780 1
CDS:C56G2.1a 6354399 6354473 1
CDS:C56G2.1a 6354801 6354956 1
CDS:C56G2.1a 6355056 6355128 1
CDS:C56G2.1a 6356365 6356535 1
CDS:C56G2.1a 6357089 6357238 1
CDS:C56G2.1a 6357523 6357582 1
CDS:C56G2.1a 6357655 6357767 1
CDS:C56G2.1a 6357813 6358090 1
CDS:C56G2.1a 6358558 6358682 1
CDS:C56G2.1a 6363686 6363841 1
CDS:C56G2.1a 6363900 6363983 1
CDS:C56G2.1a 6364040 6364373 1
CDS:C56G2.1a 6364804 6365171 1
CDS:C56G2.1a 6365258 6365419 1

1 Sequence

Length
2604

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C56G2.1a.1 C56G2.1a.1 3942   III: 6353384-6366659