WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C16A3.8 Sequence Name  C16A3.8
Length (nt)  4314   Chromosome Location  III: 6368046-6368141
Chromosome . Primary Identifier  III Chromosome Location . Start  6368046
Chromosome Location . End  6368141
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16A3.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47895 THOC-2 164.3 1437 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00002796
WBRNAi00002463
WBRNAi00024574
WBRNAi00001243
WBRNAi00027176
WBRNAi00007793
WBRNAi00083822
WBRNAi00001968
WBRNAi00010819
WBRNAi00091053
WBRNAi00076133
WBRNAi00085788
WBRNAi00077863
WBRNAi00110788
WBRNAi00040664
WBRNAi00040665
WBRNAi00117944
WBRNAi00083636

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C16A3.8 6368046 6368141 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015813 thoc-2 C16A3.8 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:C16A3.8 6368046 6368141 1
CDS:C16A3.8 6368190 6368321 1
CDS:C16A3.8 6368523 6368614 1
CDS:C16A3.8 6368661 6368880 1
CDS:C16A3.8 6369101 6369283 1
CDS:C16A3.8 6369334 6369486 1
CDS:C16A3.8 6369535 6370039 1
CDS:C16A3.8 6370268 6370669 1
CDS:C16A3.8 6370983 6371802 1
CDS:C16A3.8 6371851 6371959 1
CDS:C16A3.8 6372002 6372140 1
CDS:C16A3.8 6372189 6373048 1
CDS:C16A3.8 6373104 6373484 1
CDS:C16A3.8 6373551 6373772 1

1 Sequence

Length
4314

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C16A3.8.1 C16A3.8.1 4450   III: 6368042-6373904