WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16A3.9.1 Sequence Name  C16A3.9.1
Length (nt)  507   Chromosome Location  III: 6374097-6374997
Chromosome . Primary Identifier  III Chromosome Location . Start  6374097
Chromosome Location . End  6374997 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16A3.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004482 rps-13 C16A3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16A3.9 C16A3.9 456   III: 6374132-6374353

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16A3.9.1 6374097 6374997 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92114   257   III: 6374097-6374353 Caenorhabditis elegans
Exon92116   105   III: 6374576-6374680 Caenorhabditis elegans
Exon92117   145   III: 6374853-6374997 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16A3.9.1 6374097 6374997 -1

1 Sequence

Length
507

1 Sequence Ontology Term

Identifier Name Description
transcript