WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16A3.1a.1 Sequence Name  C16A3.1a.1
Length (nt)  2236   Chromosome Location  III: 6390946-6393844
Chromosome . Primary Identifier  III Chromosome Location . Start  6390946
Chromosome Location . End  6393844 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16A3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015806 smrc-1 C16A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16A3.1a C16A3.1a 2064   III: 6390949-6391038

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16A3.1a.1 6390946 6393844 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92151   93   III: 6390946-6391038 Caenorhabditis elegans
Exon92152   96   III: 6391404-6391499 Caenorhabditis elegans
Exon92156   144   III: 6391548-6391691 Caenorhabditis elegans
Exon92158   380   III: 6391755-6392134 Caenorhabditis elegans
Exon92161   451   III: 6392186-6392636 Caenorhabditis elegans
Exon92164   198   III: 6392683-6392880 Caenorhabditis elegans
Exon92167   501   III: 6392926-6393426 Caenorhabditis elegans
Exon92172   373   III: 6393472-6393844 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16A3.1a.1 6390946 6393844 1

1 Sequence

Length
2236

1 Sequence Ontology Term

Identifier Name Description
transcript