WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D11.5.1 Sequence Name  C05D11.5.1
Length (nt)  1395   Chromosome Location  III: 6410020-6412014
Chromosome . Primary Identifier  III Chromosome Location . Start  6410020
Chromosome Location . End  6412014 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015483 C05D11.5 C05D11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D11.5 C05D11.5 789   III: 6410101-6410279

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05D11.5.1 6410020 6412014 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92197   260   III: 6410020-6410279 Caenorhabditis elegans
Exon92198   70   III: 6410371-6410440 Caenorhabditis elegans
Exon92199   229   III: 6410526-6410754 Caenorhabditis elegans
Exon92200   243   III: 6410886-6411128 Caenorhabditis elegans
Exon92201   593   III: 6411422-6412014 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05D11.5.1 6410020 6412014 -1

1 Sequence

Length
1395

1 Sequence Ontology Term

Identifier Name Description
transcript