WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C05D11.6a Sequence Name  C05D11.6a
Length (nt)  948   Chromosome Location  III: 6412763-6412921
Chromosome . Primary Identifier  III Chromosome Location . Start  6412763
Chromosome Location . End  6412921
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D11.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37080 NAS-4, isoform a 35.7 315 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00039739
WBRNAi00022273
WBRNAi00005306
WBRNAi00028497
WBRNAi00088977

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C05D11.6a 6412763 6412921 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003523 nas-4 C05D11.6 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C05D11.6a 6412763 6412921 -1
CDS:C05D11.6a 6412970 6413156 -1
CDS:C05D11.6a 6413536 6413640 -1
CDS:C05D11.6a 6413685 6413876 -1
CDS:C05D11.6a 6414038 6414164 -1
CDS:C05D11.6a 6414209 6414302 -1
CDS:C05D11.6a 6414870 6414953 -1

1 Sequence

Length
948

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C05D11.6a.1 C05D11.6a.1 2280   III: 6411580-6415648
Transcript:C05D11.6a.2 C05D11.6a.2 1503   III: 6412248-6414993